Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ95873.1 | astE | ZOBELLIA_1820 | ZOBELLIA_1818 | Putative protein. | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | 0.576 |
| CAZ95873.1 | rimK1 | ZOBELLIA_1820 | ZOBELLIA_1819 | Putative protein. | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Localized in the cytoplasm; High confidence in function and specificity. | 0.639 |
| CAZ95873.1 | sdhA | ZOBELLIA_1820 | ZOBELLIA_1822 | Putative protein. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhA is the flavoprotein subunit. Localized in the cytoplasm; High confidence in function and specificity. | 0.525 |
| CAZ95873.1 | sdhB | ZOBELLIA_1820 | ZOBELLIA_1823 | Putative protein. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhB is the iron-sulfur subunit. Localized in the cytoplasm; High confidence in function and specificity. | 0.525 |
| CAZ95873.1 | sdhC | ZOBELLIA_1820 | ZOBELLIA_1821 | Putative protein. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhC is the cytochrome b558 subunit. It binds two hemes. Features five transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.525 |
| astE | CAZ95873.1 | ZOBELLIA_1818 | ZOBELLIA_1820 | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | Putative protein. | 0.576 |
| astE | paaY | ZOBELLIA_1818 | ZOBELLIA_2405 | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | PaaY is involved in the catabolism of phenylacetic acid. This protein belongs to the o-acetyltransferase family. Its features four tandem repeats of a [LIV]-G-X(4) hexapeptide, which has been shown to fold as a left-handed parallel beta helix; Localized in the cytoplasm; High confidence in function and specificity. | 0.485 |
| astE | rimK1 | ZOBELLIA_1818 | ZOBELLIA_1819 | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Localized in the cytoplasm; High confidence in function and specificity. | 0.938 |
| astE | rimK2 | ZOBELLIA_1818 | ZOBELLIA_2019 | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Contains a N-terminal domain of unknown function (DUF785); Localized in the cytoplasm; High confidence in function and specificity. | 0.802 |
| astE | sdhA | ZOBELLIA_1818 | ZOBELLIA_1822 | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhA is the flavoprotein subunit. Localized in the cytoplasm; High confidence in function and specificity. | 0.415 |
| astE | sdhB | ZOBELLIA_1818 | ZOBELLIA_1823 | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhB is the iron-sulfur subunit. Localized in the cytoplasm; High confidence in function and specificity. | 0.457 |
| astE | sdhC | ZOBELLIA_1818 | ZOBELLIA_1821 | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhC is the cytochrome b558 subunit. It binds two hemes. Features five transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.404 |
| paaY | astE | ZOBELLIA_2405 | ZOBELLIA_1818 | PaaY is involved in the catabolism of phenylacetic acid. This protein belongs to the o-acetyltransferase family. Its features four tandem repeats of a [LIV]-G-X(4) hexapeptide, which has been shown to fold as a left-handed parallel beta helix; Localized in the cytoplasm; High confidence in function and specificity. | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | 0.485 |
| rimK1 | CAZ95873.1 | ZOBELLIA_1819 | ZOBELLIA_1820 | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Localized in the cytoplasm; High confidence in function and specificity. | Putative protein. | 0.639 |
| rimK1 | astE | ZOBELLIA_1819 | ZOBELLIA_1818 | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Localized in the cytoplasm; High confidence in function and specificity. | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | 0.938 |
| rimK1 | sdhA | ZOBELLIA_1819 | ZOBELLIA_1822 | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Localized in the cytoplasm; High confidence in function and specificity. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhA is the flavoprotein subunit. Localized in the cytoplasm; High confidence in function and specificity. | 0.443 |
| rimK1 | sdhB | ZOBELLIA_1819 | ZOBELLIA_1823 | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Localized in the cytoplasm; High confidence in function and specificity. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhB is the iron-sulfur subunit. Localized in the cytoplasm; High confidence in function and specificity. | 0.448 |
| rimK1 | sdhC | ZOBELLIA_1819 | ZOBELLIA_1821 | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Localized in the cytoplasm; High confidence in function and specificity. | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhC is the cytochrome b558 subunit. It binds two hemes. Features five transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.443 |
| rimK2 | astE | ZOBELLIA_2019 | ZOBELLIA_1818 | Ribosomal protein S6 modification protein; RimK is responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6. This protein forms a dimer; Binds one ATP and 2 manganese ions by subunit; Contains a N-terminal domain of unknown function (DUF785); Localized in the cytoplasm; High confidence in function and specificity. | Succinylglutamate desuccinylase catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes 2-N-succinylglutamate into succinate and glutamate. It binds one zinc ion as a cofactor. Localized in the cytoplasm; High confidence in function and specificity. | 0.802 |
| sdhA | CAZ95873.1 | ZOBELLIA_1822 | ZOBELLIA_1820 | Succinate dehydrogenase is a complex containing three subunits: a flavoprotein, an iron-sulfur protein and cytochrome b-558. It is involved in the citrate cycle and catalyzes the reaction: succinate + acceptor = fumarate + reduced acceptor. It uses a FAD as a cofactor. SdhA is the flavoprotein subunit. Localized in the cytoplasm; High confidence in function and specificity. | Putative protein. | 0.525 |
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